Nishat Anjum Bristy

GHC 7505
Carnegie Mellon University
Pittsburgh, PA 15213
I am a third year PhD student in the Ray and Stephanie Lane Computational Biology Department at Carnegie Mellon University. I am fortunate to be advised by Dr. Russell Schwartz. My research interests broadly lie in the area of -
- Tumor Phylogeny
- Bulk and Single-cell multi-omics
- Algorithms
- Machine Learning for Health
- Discrete and Continuous Optimization Problems
I have completed my undergraduate studies in Computer Science and Engineering from Bangladesh University of Engineering and Technology, where I worked under the supervision of Dr. Md. Shamsuzzoha Bayzid on alignment-based and alignment-free phylogenetic distance estimation.
Apart from work, I am enthusiastic about swimming and reading.
News
Jul 10, 2024 | I am honored to receive the CMLH Fellowship in Digital Health Innovations, 2024. |
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Apr 27, 2024 | Presented my work, Sc-TUSV-ext, at RECOMB-CCB, 2024. [slides] |
Mar 12, 2024 | My work titled Sc-TUSV-ext is accepted at RECOMB-CCB, 2024. |
Selected Publications
- bioRxivDeconvolution and Phylogeny Inference of Diverse Variant Types Integrating Bulk DNA-seq with Single-cell RNA-seqbioRxiv, 2025
- RECOMB-CCBSc-TUSV-ext: Single-cell clonal lineage inference from single nucleotide variants (SNV), copy number alterations (CNA) and structural variants (SV)Journal of Computational Biology, 2023
- Bioinform. Adv.Genome-wide alignment-free phylogenetic distance estimation under a no strand-bias modelBioinformatics Advances, 2022